8 documentos corresponden a la consulta.
Palabras contadas: dynamical: 52, characteristics: 93
Elola, M.D. - Rodriguez, J. - Laria, D.
J Chem Phys 2010;133(15)
2010
Temas: Breaking process - Dispersive forces - Dynamical analysis - Dynamical behaviors - Functionalized silica - Hydrogen-bond formation - Hydrophobic pore - Hydroxyl groups - Hydroxylated surfaces - Liquid methanol
Descripción: Molecular dynamics simulations have been carried out to investigate the structure and dynamics of liquid methanol confined in 3.3 nm diameter cylindrical silica pores. Three cavities differing in the characteristics of the functional groups at their walls have been examined: (i) smooth hydrophobic pores in which dispersive forces prevail, (ii) hydrophilic cavities with surfaces covered by polar silanol groups, and (iii) a much more rugged pore in which 60% of the previous interfacial hydroxyl groups were replaced by the bulkier trimethylsilyl ones. Confinement promotes a considerable structure at the vicinity of the pore walls which is enhanced in the case of hydroxylated surfaces. Moreover, in the presence of the trimethylsilyl groups, the propagation of this interface-induced spatial ordering extends down to the central region of the pore. Concerning the dynamical modes, we observed an overall slowdown in both the translational and rotational motions. An analysis of these mobilities from a local perspective shows that the largest retardations operate at the vicinity of the interfaces. The gross features of the rotational dynamics were analyzed in terms of contributions arising from bulk and surface states. Compared to the bulk dynamical behavior, the characteristic timescales associated with the rotational motions show the most dramatic increments. A dynamical analysis of hydrogen bond formation and breaking processes is also included. © 2010 American Institute of Physics.
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Dorso, C.O. - Hernndez, E.S. - Vega, J.L.
Physical Review E 1993;47(1):300-304
1993
Descripción: We extend the master-equation treatment of dynamical evolution of a system-plus-reservoir configuration including the propagation of initial correlations as a noise source. Specializing into the quantum harmonic oscillator coupled to a fermionic heat bath, we develop a model for the diffusion matrix in the space of diagonal density operators. It can be shown that mean values of observables undergo Langevin-like motion and, in particular, that the mean value and dispersion of the oscillator quanta approach the canonical equilibrium values. A final interpretation of the characteristics and role of the noise source is given. © 1993 The American Physical Society.
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Elola, M.D. - Laria, D.
J Chem Phys 2002;117(5):2238-2245
2002
Temas: Algorithms - Chemical relaxation - Diffusion - Electronic properties - Ground state - Mathematical models - Molecular structure - Photochemical reactions - Quantum theory - Solutions
Descripción: New insights into equilibrium and dynamical aspects of electron photodetachment reactions in small water clusters were given. It focuses on assessing the effects of thermal and polarization fluctuations provided by three cluster environments with different extents of spatial confinement, on the microscopic mechanisms that drive the reaction. These fluctuations, in turn, determine the characteristics of the electron localization and the subsequent detachment following photoexcitation of the probe.
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Videla, P.E. - Rossky, P.J. - Laria, D.
J Chem Phys 2013;139(16)
2013
Temas: Ambient conditions - Dynamical characteristics - Linear-response theory - Polarization fluctuations - Quantum fluctuation - Quantum molecular dynamics - Quantum solvation - Solvation response - Molecular dynamics - Positive ions
Descripción: Ring polymer molecular dynamics experiments have been carried out to examine effects derived from nuclear quantum fluctuations at ambient conditions on equilibrium and non-equilibrium dynamical characteristics of charge solvation by a popular simple, rigid, water model, SPC/E, and for a more recent, and flexible, q-TIP4P/F model, to examine the generality of conclusions. In particular, we have recorded the relaxation of the solvent energy gap following instantaneous, ±e charge jumps in an initially uncharged Lennard-Jones-like solute. In both charge cases, quantum effects are reflected in sharper decays at the initial stages of the relaxation, which produce up to a ∼20% reduction in the characteristic timescales describing the solvation processes. For anionic solvation, the magnitude of polarization fluctuations controlling the extent of the water proton localization in the first solvation shell is somewhat more marked than for cations, bringing the quantum solvation process closer to the classical case. Effects on the solvation response from the explicit incorporation of flexibility in the water Hamiltonian are also examined. Predictions from linear response theories for the overall relaxation profile and for the corresponding characteristic timescales are reasonably accurate for the solvation of cations, whereas we find that they are much less satisfactory for the anionic case. © 2013 AIP Publishing LLC.
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Semino, R. - Martí, J. - Guàrdia, E. - Laria, D.
J Chem Phys 2012;137(19)
2012
Temas: Acetone molecules - Aprotic - Aqueous phase - Cluster morphology - Cluster structure - Concentration fluctuation - Diffusive motions - Dynamical characteristics - Exchange process - Inner region
Descripción: We carried out molecular dynamics simulation experiments to examine equilibrium and dynamical characteristics of the solvation of excess protons in mesoscopic, [m:n] binary polar clusters comprising m 50 water molecules and n 6, 25, and 100 acetone molecules. Contrasting from what is found in conventional macroscopic phases, the characteristics of the proton solvation are dictated, to a large extent, by the nature of the concentration fluctuations prevailing within the clusters. At low acetone contents, the overall cluster morphology corresponds to a segregated aqueous nucleus coated by an external aprotic phase. Under these circumstances, the proton remains localized at the surface of the water core, in a region locally deprived from acetone molecules. At higher acetone concentrations, we found clear evidence of the onset of the mixing process. The cluster structures present aqueous domains with irregular shape, fully embedded within the acetone phase. Still, the proton remains coordinated to the aqueous phase, with its closest solvation shell composed exclusively by three water molecules. As the relative concentration of acetone increases, the time scales characterizing proton transfer events between neighboring water molecules show considerable retardations, stretching into the nanosecond time domain already for n ∼ 25. In water-rich aggregates, and similarly to what is found in the bulk, proton transfers are controlled by acetone/water exchange processes taking place at the second solvation shell of the proton. As a distinctive feature of the transfer mechanism, translocation pathways also include diffusive motions of the proton from the surface down into inner regions of the underlying water domain. © 2012 American Institute of Physics.
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Semino, R. - Laria, D.
J Chem Phys 2012;136(19)
2012
Temas: Acetone molecules - Concentration dependence - Dynamical characteristics - Hydrogen bond acceptors - Molar fractions - Pure water - Quantitative level - Relative concentration - Solvation shell - Transition regions
Descripción: Using molecular dynamics experiments, we analyze equilibrium and dynamical characteristics related to the solvation of excess protons in water-acetone mixtures. Our approach is based on the implementation of an extended valence-bond Hamiltonian, which incorporates translocation of the excess charge between neighboring water molecules. Different mixtures have been analyzed, starting from the pure water case down to solutions with a water molar fraction x w 0.25. In all cases, we have verified that the structure of the first solvation shell of the H 3 O moiety remains practically unchanged, compared to the one observed in pure water. This shell is composed by three water molecules acting as hydrogen bond acceptors, with no evidence of hydrogen bond donor-like connectivity. Moreover, the increment in the acetone concentration leads to a gradual stabilization of Eigen-like [H 3O·(H 2O) 3] configurations, in detriment of Zundel-like [H·(H 2O) 2] ones. Rates of proton transfer and proton diffusion coefficients have been recorded at various water-acetone relative concentrations. In both cases, we have found a transition region, in the vicinity of x w ∼ 0.8, where the concentration dependences of the two magnitudes change at a quantitative level. A crude estimate shows that, at this tagged concentration, the volumes occupied by the two solvents become comparable. The origins of this transition separating water-rich from acetone-rich realms is rationalized in terms of modifications operated in the nearby, second solvation shell, which in the latter solutions, normally includes at least, one acetone molecule. Our results would suggest that one possible mechanism controlling the proton transfer in acetone-rich solutions is the exchange of one of these tagged acetone molecules, by nearby water ones. This exchange would give rise to Zundel-like structures, exhibiting a symmetric, first solvation shell composed exclusively by water molecules, and would facilitate the transfer between neighboring water molecules along the resonant complex. © 2012 American Institute of Physics.
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Videla, P.E. - Rossky, P.J. - Laria, D.
J Chem Phys 2013;139(17)
2013
Temas: Collective dynamics - Connectivity pattern - Instantaneous normal modes - Intermolecular distance - Many-body potentials - Nuclear quantum effects - Polarization fluctuations - Spatial delocalization - Absorption spectroscopy - Dangling bonds
Descripción: We use ring-polymer-molecular-dynamics (RPMD) techniques and the semi-empirical q-TIP4P/F water model to investigate the relationship between hydrogen bond connectivity and the characteristics of nuclear position fluctuations, including explicit incorporation of quantum effects, for the energetically low lying isomers of the prototype cluster [H2O] 8 at T = 50 K and at 150 K. Our results reveal that tunneling and zero-point energy effects lead to sensible increments in the magnitudes of the fluctuations of intra and intermolecular distances. The degree of proton spatial delocalization is found to map logically with the hydrogen-bond connectivity pattern of the cluster. Dangling hydrogen bonds exhibit the largest extent of spatial delocalization and participate in shorter intramolecular O-H bonds. Combined effects from quantum and polarization fluctuations on the resulting individual dipole moments are also examined. From the dynamical side, we analyze the characteristics of the infrared absorption spectrum. The incorporation of nuclear quantum fluctuations promotes red shifts and sensible broadening relative to the classical profile, bringing the simulation results in much more satisfactory agreement with direct experimental information in the mid and high frequency range of the stretching band. While RPMD predictions overestimate the peak position of the low frequency shoulder, the overall agreement with that reported using an accurate, parameterized, many-body potential is reasonable, and far superior to that one obtains by implementing a partially adiabatic centroid molecular dynamics approach. Quantum effects on the collective dynamics, as reported by instantaneous normal modes, are also discussed. © 2013 AIP Publishing LLC.
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Clavero, E. - Rodriguez, J. - Laria, D.
J Chem Phys 2007;127(12)
2007
Temas: Adsorption - Density (specific gravity) - Molecular dynamics - Phase interfaces - Substrates - Dodecytrimethylammonium - Interfacial domains - Tessellation - Water/air interfaces - Cationic surfactants
Descripción: We extend our previous molecular dynamics experiments [Rodriguez, J. Phys. Chem. B 109, 24427 (2005)] to the analysis of the adsorption of catanionic surfactants at water/air interfaces, at a surfactant coverage close to that of the saturated monolayer: 30.3 Å2 per headgroup. The mixture of surfactants investigated corresponds to equal amounts of dodecytrimethylammonium (DTA) and dodecylsulfate (DS). The structure of the interface is analyzed in terms of the local densities and orientational correlations of all relevant interfacial species. In accordance with experimental evidence, the DTA headgroups penetrate deeper into the aqueous substrate than the DS ones, although the average positions of all headgroups, with respect to the interface, lie in positions somewhat more external than the ones observed at lower coverages. Average tail tilts are close to 45°. The characteristics of the headgroup-water substrate correlations are also analyzed using a tessellation procedure of the interface. The density and polarization responses of the interfacial domains closest to the DS headgroups are enhanced, compared to those adjacent to the DTA detergents. Dynamical aspects related to the diffusion and to the orientational correlations of different water layers in close contact with the surfactant are also investigated. © 2007 American Institute of Physics.
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