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Arbó, D.G. - Ishikawa, K.L. - Persson, E. - Burgdörfer, J.
J. Phys. Conf. Ser. 2012;388(PART 3)
2012

Descripción: We analyze the doubly-differential momentum distributions of electrons ejected at the interaction of strong IR laser pulses with atoms. With the help of a semiclassical model we clarify the interplay between intracycle and intercycle interferences. The model results are compared with numerical solutions of the time-dependent Schrödinger equation for atoms with long-range potentials. Similarities and differences will be discussed. © Published under licence by IOP Publishing Ltd.
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Amster, P. - De Nápoli, P. - Zubelli, J.P.
J. Math. Anal. Appl. 2009;355(1):170-179
2009

Descripción: We pose the problem of generalizing Dupire's equation for the price of call options on a basket of underlying assets. We present an analogue of Dupire's equation that holds in the case of several underlying assets provided the volatility is time dependent but not asset-price dependent. We deduce it from a relation that seems to be of interest on its own. © 2009 Elsevier Inc. All rights reserved.
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Arrachea, L. - Rizzo, B.
J. Phys. Conf. Ser. 2013;427
2013

Descripción: We review a recent theoretical development based on non-equilibrium Green's function formalism to study heat transport in nanomechanical devices modeled by phononic systems of coupled quantum oscillators driven by ac forces and connected to phononic reservoirs. We present the relevant equations to calculate the heat currents flowing along different regions of the setup, as well as the power developed by the time-dependent forces. We also present different strategies to evaluate the Green's functions exactly or approximately within the weak driving regime. We finally discuss the different mechanisms in which the ac driving forces deliver the energy. We show that, besides generating heat, the forces may operate exchanging energy as a quantum engine.
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Arrachea, L. - Mucciolo, E.R. - Chamon, C. - Capaz, R.B.
Phys. Rev. B Condens. Matter Mater. Phys. 2012;86(12)
2012

Descripción: We analyze a simple microscopic model to pump heat from a cold to a hot reservoir in a nanomechanical system. The model consists of a one-dimensional chain of masses and springs coupled to a back gate through which a time-dependent perturbation is applied. The action of the gate creates a moving phononic barrier by locally pinning a mass. We solve the problem numerically using a nonequilibrium Green's function technique. For low driving frequencies and for sharp traveling barriers, we show that this microscopic model realizes a phonon refrigerator. © 2012 American Physical Society.
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Rios, C.A. - Gravielle, M.S. - Mitnik, D.M. - Silkin, V.M.
J. Phys. Conf. Ser. 2012;388(PART 13)
2012

Descripción: Photoelectron emission spectra induced by grazing incidence of intense and ultrashort laser pulses on a metal surface are studied within a distorted-wave formalism. The proposed aproximation, named Band-Structure Based-Volkov (BSB-V) approach, includes a precise description of the surface potential, incorporating information of the band structure of the solid. Results are compared with the numerical solution of the time-dependent Schrodinger equation and with values derived from simpler theoretical models. © Published under licence by IOP Publishing Ltd.
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Ferraro, R. - Simeone, C.
J. Math. Phys. 1997;38(2):599-610
1997

Descripción: It is well known that - differing from ordinary gauge systems - canonical gauges are not admissible in the path integral for parametrized systems. This is the case for the relativistic particle and gravitation However, a time dependent canonical transformation can turn a parametrized system into an ordinary gauge system. It is shown how to build a canonical transformation such that the fixation of the new coordinates is equivalent to the fixation of the original ones; this aim can be achieved only if the Hamiltonian constraint allows for an intrinsic global time. Thus the resulting action, describing an ordinary gauge system and allowing for canonical gauges, can be used in the path integral for the quantum propagator associated with the original variables. © 1997 American Institute of Physics.
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Ocampo, J. - Nuñez, L.F. - Silva, F. - Pereyra, E. - Moreno, S. - Garre, V. - Rossi, S.
Eukaryotic Cell 2009;8(7):933-944
2009

Descripción: The cyclic AMP (cAMP)-dependent protein kinase A (PKA) signaling pathway plays a role in regulating development, growth, and virulence in a number of fungi. To determine whether PKA plays a similar function in zygomycete fungi, a mutant of Mucor circinelloides was generated that lacks pkaR1, one of the regulatory subunits of PKA. The mutant showed a reduction in growth and alterations in germination rates, cell volume, germ tube length, and asexual sporulation. The lack of pkaR1 gene resulted in a highly decreased, but not null, cAMP binding activity and in a protein kinase activity that was still dependent on cAMP, although with a higher -/+ cAMP activity ratio, suggesting the existence of other cAMP binding activities. Consequently, three proteins analogous to pkaR1 were predicted from the recently sequenced genome of M. circinelloides and were named pkaR2, pkaR3, and pkaR4. Two of the proteins, pkaR2 and pkaR3, with cAMP binding activity were isolated from the wild-type strain and identified by mass spectrometry. The expression of all genes was detected at the mRNA level by semiquantitative reverse transcription-PCR, and they showed a differential expression at different developmental stages. This is the first time that a fungus is reported to have more than one gene encoding the regulatory subunit of PKA. © 2009, American Society for Microbiology.
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Borodinsky, L.N. - Coso, O.A. - Fiszman, M.L.
J. Neurochem. 2002;80(6):1062-1070
2002

Descripción: In this report we describe our studies on intracellular signals that mediate neurite outgrowth and long-term survival of cerebellar granule cells. The effect of voltage-gated calcium channel activation on neurite complexity was evaluated in cultured cerebellar granule cells grown for 48 h at low density; the parameter measured was the fractal dimension of the cell. We explored the contribution of two intracellular pathways, Ca2+ calmodulin-dependent protein kinase II and mitogen-activated protein kinase kinase (MEK1), to the effects of high [K+]e under serum-free conditions. We found that 25 mM KCI (25K) induced an increase in calcium influx through L subtype channels. In neurones grown for 24-48 h under low-density conditions, the activation of these channels induced neurite outgrowth through the activation of Ca2+ calmodulin-dependent protein kinase II. This also produced an increase in long-term neuronal survival with a partial contribution from the MEK1 pathway. We also found that the addition of 25K increased the levels of the phosphorylated forms of Ca2+ calmodulin-dependent protein kinase II and of the extracellular signal-regulated kinases 1 and 2. Neuronal survival under resting conditions is supported by the MEK1 pathway. We conclude that intracellular calcium oscillations can triggered different biological effects depending on the stage of maturation of the neuronal phenotype. Ca2+ calmodulin-dependent protein kinase II activation determines the growth of neurites and the development of neuronal complexity.
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Bonfiglio, J.J. - Inda, C. - Senin, S. - Maccarrone, G. - Refojo, D. - Giacomini, D. - Turck, C.W. - Holsboer, F. - Arzt, E. - Silberstein, S.
Mol. Endocrinol. 2013;27(3):491-510
2013

Descripción: CRH is a key regulator of neuroendocrine, autonomic, and behavioral response to stress. CRHstimulated CRH receptor 1 (CRHR1) activates ERK1/2 depending on intracellular context. In a previous work, we demonstrated that CRH activates ERK1/2 in limbic areas of the mouse brain (hippocampus and basolateral amygdala). ERK1/2 is an essential mediator of hippocampal physiological processes including emotional behavior, synaptic plasticity, learning, and memory. To elucidate the molecular mechanisms by which CRH activates ERK1/2 in hippocampal neurons, we used the mouse hippocampal cell line HT22. We document for the first time that ERK1/2 activation in response to CRH is biphasic, involving a first cAMP- and B-Raf-dependent early phase and a second phase that critically depends on CRHR1 internalization and β-arrestin2. By means of mass-spectrometry-based screening, we identified B-Raf-associated proteins that coimmunoprecipitate with endogenous B-Raf after CRHR1 activation. Using molecular and pharmacological tools, the functional impact of selected B-Raf partners in CRH-dependent ERK1/2 activation was dissected. These results indicate that 14-3-3 proteins, protein kinase A, and Rap1, are essential for early CRH-induced ERK1/2 activation, whereas dynamin and vimentin are required for the CRHR1 internalization-dependent phase. Both phases of ERK1/2 activation depend on calcium influx and are affected by calcium/calmodulin-dependent protein kinase II inactivation. Thus, this report describes the dynamics and biphasic nature of ERK1/2 activation downstream neuronal CRHR1 and identifies several new critical components of the CRHR1 signaling machinery that selectively controls the early and late phases of ERK1/2 activation, thus providing new potential therapeutic targets for stress-related disorders. © 2013 by The Endocrine Society.
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Castro, C.P. - Peñalva, R. - Pereda, M.P. - Renner, U. - Reul, J.M.H.M. - Stalla, G.K. - Holsboer, F. - Arzt, E.
Endocrinology 1999;140(2):690-697
1999

Descripción: Functional interaction between the immune and neuroendocrine systems is mediated by humoral mediators, neurotransmitters, and cytokines, including TRH and PRL. We examined the role of neuroendocrine changes, particularly TRH and PRL, during the T cell-dependent immune response. After immunization of rats with sheep red blood cells (SRBC, a T cell-dependent antigen), an increase of hypothalamic TRH messenger RNA (mRNA) was observed at 4-24 h post immunization, in contrast to the decrease observed after treatment with lipopolysaccharide (LPS). During the above period, with SRBC, there was an increase in pituitary TRH receptor mRNA and plasma PRL levels but no changes in TSH and GH. Also, in contrast to the early corticosterone peak induced by LPS, the activation of the hypothalamic-pituitary-adrenocortical suppressive response appears in a late phase, 5-7 days after SRBC. Intracerebroventricular injection of antisense oligonucleotide complementary to rat TRH mRNA in conscious freely-moving rats immunized with SRBC resulted in a significant inhibition of specific antibody production and a concomitant inability to produce the peak in plasma PRL levels. These studies demonstrate, for the first time, that the T cell-dependent immune response is critically dependent on the early activation of TRH and PRL and that the neuroendocrine changes occurring during it are profoundly different from those occurring during the T cell-independent and inflammatory responses (LPS model).
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Marcelli, A. - Abbruzzetti, S. - Bustamante, J.P. - Feis, A. - Bonamore, A. - Boffi, A. - Gellini, C. - Salvi, P.R. - Estrin, D.A. - Bruno, S. - Viappiani, C. - Foggi, P.
PLoS ONE 2012;7(7)
2012

Descripción: CO recombination kinetics has been investigated in the type II truncated hemoglobin from Thermobifida fusca (Tf-trHb) over more than 10 time decades (from 1 ps to ~100 ms) by combining femtosecond transient absorption, nanosecond laser flash photolysis and optoacoustic spectroscopy. Photolysis is followed by a rapid geminate recombination with a time constant of ~2 ns representing almost 60% of the overall reaction. An additional, small amplitude geminate recombination was identified at ~100 ns. Finally, CO pressure dependent measurements brought out the presence of two transient species in the second order rebinding phase, with time constants ranging from ~3 to ~100 ms. The available experimental evidence suggests that the two transients are due to the presence of two conformations which do not interconvert within the time frame of the experiment. Computational studies revealed that the plasticity of protein structure is able to define a branched pathway connecting the ligand binding site and the solvent. This allowed to build a kinetic model capable of describing the complete time course of the CO rebinding kinetics to Tf-trHb. © 2012 Marcelli et al.
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Mensch, J. - Lavagnino, N. - Carreira, V.P. - Massaldi, A. - Hasson, E. - Fanara, J.J.
BMC Dev. Biol. 2008;8
2008

Descripción: Background. Understanding the genetic architecture of ecologically relevant adaptive traits requires the contribution of developmental and evolutionary biology. The time to reach the age of reproduction is a complex life history trait commonly known as developmental time. In particular, in holometabolous insects that occupy ephemeral habitats, like fruit flies, the impact of developmental time on fitness is further exaggerated. The present work is one of the first systematic studies of the genetic basis of developmental time, in which we also evaluate the impact of environmental variation on the expression of the trait. Results. We analyzed 179 co-isogenic single P[GT1]-element insertion lines of Drosophila melanogaster to identify novel genes affecting developmental time in flies reared at 25°C. Sixty percent of the lines showed a heterochronic phenotype, suggesting that a large number of genes affect this trait. Mutant lines for the genes Merlin and Karl showed the most extreme phenotypes exhibiting a developmental time reduction and increase, respectively, of over 2 days and 4 days relative to the control (a co-isogenic P-element insertion free line). In addition, a subset of 42 lines selected at random from the initial set of 179 lines was screened at 17°C. Interestingly, the gene-by-environment interaction accounted for 52% of total phenotypic variance. Plastic reaction norms were found for a large number of developmental time candidate genes. Conclusion. We identified components of several integrated time-dependent pathways affecting egg-to-adult developmental time in Drosophila. At the same time, we also show that many heterochronic phenotypes may arise from changes in genes involved in several developmental mechanisms that do not explicitly control the timing of specific events. We also demonstrate that many developmental time genes have pleiotropic effects on several adult traits and that the action of most of them is sensitive to temperature during development. Taken together, our results stress the need to take into account the effect of environmental variation and the dynamics of gene interactions on the genetic architecture of this complex life-history trait. © 2008 Mensch et al; licensee BioMed Central Ltd.
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Malanca, F.E. - Canziani, P.O. - Argüello, G.A.
J. Geophys. Res. D Atmos. 2005;110(5):1-12
2005

Descripción: The variability of atmospheric midlatitudinal ozone between 1980 and 2000 over the Southern Hemisphere is discussed. The distribution of ozone and ozone change during the seasonal cycle is discussed using Total Ozone Mapping Spectrometer Nimbus and Earth Probe data binned at 72 (30° longitude by 5° latitude) bins, between 60° and 30°S. Rather than using a standard trend approach, the annual mean time series for each bin were fitted with a cubic polynomial. The results show that in the zonal mean sense there is a sizable, latitude-dependent slowdown of the ozone loss from the early 1990s onward, but when individual bins are considered, significant longitudinal patterns of ozone change appear, with both positive (enhancement) and negative (depletion) changes in total ozone. Thus regional evolution remains important as an indicator both of chemical depletion evolution and the relation with climate. Such longitudinal behavior is limited in the subtropics and grows toward the subpolar edge of the sampled region. For example, a large decrease was observed over southern South America in the 1990s, but during the 1990s there was only a limited change. The analysis for January, June, and October over the 20-year period shows changes in the evolution along the year, both in time and space. Furthermore, such seasonally dependent changes reach a peak in October, as would be expected. The October pattern of interannual variability could be linked to Southern Annular Mode, though there probably are some other processes driving it. Copyright 2005 by the American Geophysical Union.
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Maymó, J.L. - Pérez Pérez, A. - Maskin, B. - Dueñas, J.L. - Calvo, J.C. - Sánchez Margalet, V. - Varone, C.L.
PLoS ONE 2012;7(10)
2012

Descripción: Pleiotropic effects of leptin have been identified in reproduction and pregnancy, particularly in the placenta, where it works as an autocrine hormone. In this work, we demonstrated that human chorionic gonadotropin (hCG) added to JEG-3 cell line or to placental explants induces endogenous leptin expression. We also found that hCG increased cAMP intracellular levels in BeWo cells in a dose-dependent manner, stimulated cAMP response element (CRE) activity and the cotransfection with an expression plasmid of a dominant negative mutant of CREB caused a significant inhibition of hCG stimulation of leptin promoter activity. These results demonstrate that hCG indeed activates cAMP/PKA pathway, and that this pathway is involved in leptin expression. Nevertheless, we found leptin induction by hCG is dependent on cAMP levels. Treatment with (Bu)2cAMP in combination with low and non stimulatory hCG concentrations led to an increase in leptin expression, whereas stimulatory concentrations showed the opposite effect. We found that specific PKA inhibition by H89 caused a significant increase of hCG leptin induction, suggesting that probably high cAMP levels might inhibit hCG effect. It was found that hCG enhancement of leptin mRNA expression involved the MAPK pathway. In this work, we demonstrated that hCG leptin induction through the MAPK signaling pathway is inhibited by PKA. We observed that ERK1/2 phosphorylation increased when hCG treatment was combined with H89. In view of these results, the involvement of the alternative cAMP/Epac signaling pathway was studied. We observed that a cAMP analogue that specifically activates Epac (CPT-OMe) stimulated leptin expression by hCG. In addition, the overexpression of Epac and Rap1 proteins increased leptin promoter activity and enhanced hCG. In conclusion, we provide evidence suggesting that hCG induction of leptin gene expression in placenta is mediated not only by activation of the MAPK signaling pathway but also by the alternative cAMP/Epac signaling pathway. © 2012 Maymó et al.
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Portela, P. - Howell, S. - Moreno, S. - Rossi, S.
J. Biol. Chem. 2002;277(34):30477-30487
2002

Descripción: Saccharomyces cerevisiae pyruvate kinase 1 (Pyk1) was demonstrated to be associated to an immunoprecipitate of yeast protein kinase A holoenzyme (HA. Tpk1-Bcy1) and to be phosphorylated in a cAMP-dependent process. Both glutathione S-transferase (GST)-Pyk1 and GST-Pyk2 were phosphorylated in vitro by the bovine heart protein kinase A (PKA) catalytic subunit and by immobilized yeast HA-Tpk1. The specificity constant for the phosphorylation of GST-Pyk1 and GST-Pyk2 by bovine catalytic subunit was in the range of the value for Leu-Arg-Arg-Ala-Ser-Leu-Gly (Kemptide). Both fusion proteins were phosphorylated in vivo, in intact cells overexpressing the protein, or in vitro using crude extracts, as source of protein kinase A, when a wild type strain was used but were not phosphorylated when using a strain with only one TPK gene with an attenuated mutation (tpk1w1). The effect of phosphorylation on Pyk activity was assayed in partially purified preparations from three strains, containing different endogenous protein kinase A activity levels. Pyk1 activity was measured at different phosphoenolpyruvate concentrations in the absence or in the presence of the activator fructose 1,6-bisphosphate at 1.5 mM. Preliminary kinetic results derived from the comparison of Pyk1 obtained from extracts with the highest versus those from the lowest protein kinase A activity indicate that the enzyme is more active upon phosphorylation conditions; in the absence of the activator it shows a shift in the titration curve for phosphoenolpyruvate to the left and an increase in the Hill coefficient, whereas in the presence of fructose 1,6-bisphosphate it shows an nH value of 1.4, as compared with an nH of 2 for the Pyk1 obtained from extracts with almost null protein kinase A activity.
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Maymó, J.L. - Pérez, A.P. - Sánchez-Margalet, V. - Dueñas, J.L. - Calvo, J.C. - Varone, C.L.
Endocrinology 2009;150(1):304-313
2009

Descripción: Leptin, the 16,000 molecular weight protein product of the obese gene, was originally considered as an adipocyte-derived signaling moleculeforthe central control of metabolism. However, leptin has been suggested to be involved in other functions during pregnancy, particularly in placenta, in which it was found to be expressed. In the present work, we have found that recombinant human chorionic gonadotropin (hCG) added to BeWo choriocarcinoma cell line showed a stimulatory effect on endogenous leptin expression, when analyzed by Western blot. This effect was time and dose dependent. Maximal effect was achieved at hCG 100 IU/ml. Moreover, hCG treatment enhanced leptin promoter activity up to 12.9 times, evaluated by transient transfection with a plasmid construction containing different promoter regions and the reporter gene luciferase. This effect was dose dependent and evidenced with all the promoter regions analyzed, regardless of length. Similar results were obtained with placental explants, thus indicating physiological relevance. Because hCG signal transduction usually involves cAMP signaling, this pathway was analyzed. Contrarily, we found that dibutyryl cAMP counteracted hCG effect on leptin expression. Furthermore, cotransfection with the catalytic subunit of PKA and/or the transcription factor cAMP response element binding protein repressed leptin expression. Thereafter we determined that hCG effect could be partially blocked by pharmacologic inhibition of MAPK pathway with 50 μM PD98059 but not by the inhibition of the phosphatidylinositol 3-kinase pathway with 0.1 μm wortmannin. Moreover, hCG treatment promoted MAPK kinase and ERK1/ERK2 phosphorylation in placental cells. Finally, cotransfection with a dominant-negative mutant of MAPK blocked the hCG-mediated activation of leptin expression. In conclusion, we provide some evidence suggesting that hCG induces leptin expression in trophoblastic cells probably involving the MAPK signal transduction pathway. Copyright © 2009.
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Luquet, C.M. - Weihrauch, D. - Senek, M. - Towle, D.W.
J. Exp. Biol. 2005;208(19):3627-3636
2005

Descripción: Using quantitative real-time PCR, the expression of mRNAs encoding three transport-related proteins and one putative housekeeping protein was analyzed in anterior and posterior gills of the euryhaline crab Chasmagnathus granulatus following transfer from isosmotic conditions (30‰ salinity) to either dilute (2‰) or concentrated (45‰) seawater. Modest changes were observed in the abundance of mRNAs encoding the housekeeping protein arginine kinase and the vacuolar-type H+-ATPase B-subunit, both of which were highly expressed under all conditions. By contrast, the expression of Na +/K+-ATPase α-subunit mRNA and Na+/K +/2Cl- cotransporter mRNA was strongly responsive to external salinity. During acclimation to dilute seawater, cotransporter mRNA increased 10-20-fold in posterior gills within the first 24 h while Na +/K+-ATPase α-subunit mRNA increased 35-55-fold. During acclimation to concentrated seawater, cotransporter mRNA increased 60-fold by 96 h and Na+/K+-ATPase α-subunit increased approximately 25-fold in posterior gills. Our results indicate a complex pattern of transcriptional regulation dependent upon the direction of salinity change and the developmental background of the gills.
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Nacir, D.L. - Porto, R.A. - Senatored, L. - Zaldarriaga, M.
J. High Energy Phys. 2012;2012(1)
2012

Descripción: We generalize the effective field theory of single clock inflation to include dissipative effects. Working in unitary gauge we couple a set of composite operators, OZ μ...., in the effective action which is constrained solely by invariance under time-dependent spatial diffeomorphisms. We restrict ourselves to situations where the degrees of freedom responsible for dissipation do not contribute to the density perturbations at late time. The dynamics of the perturbations is then modified by the appearance of 'friction' and noise terms, and assuming certain locality properties for the Green's functions of these composite operators, we show that there is a regime characterized by a large friction term γ H in which the ζ-correlators are dominated by the noise and the power spectrum can be significantly enhanced. We also compute the three point function hζζζi for a wide class of models and discuss under which circumstances large friction leads to an increased level of non-Gaussianities. In particular, under our assumptions, we show that strong dissipation together with the required non-linear realization of the symmetries implies |fNL| ∼ . c2s H 1. As a paradigmatic example we work out a variation of the 'trapped inflation' scenario with local response functions and perform the matching with our effective theory. A detection of the generic type of signatures that result from incorporating dissipative effects during inflation, as we describe here, would teach us about the dynamics of the early universe and also extend the parameter space of inflationary models. © SISSA 2012.
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Del C. Batlle, A.M. - De Salamanca, R.E. - Chinarro, S. - Afonso, S.G. - Stella, A.M.
Int. J. Biochem. 1986;18(2):143-147
1986

Descripción: 1. 1. The effects of light and porphyrins on the activity of red cell uroporphyrinogen decarboxylase were studied. 2. 2. Photoinactivation of uroporphyrinogen decarboxylase was dependent on uroporphyrin concentration, irradiation time and temperature. Using 40 W/m2 of UV light intensity, 40-45% decreased activity was produced with 200 μM uroporphyrin I, at 37°C and after 2 hr of illumination. 3. 3. It has been demonstrated that porphyrins photoinactivate uroporphyrinogen decarboxylase and a mechanism for this action in relation to skin lesions is proposed. © 1986.
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